Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815727.1_cds_XP_016498450.1_12476
CDS Infomation

[gene=LOC107817187] [db_xref=GeneID:107817187] [protein=3-phosphoinositide-dependent protein kinase 2-like isoform X2] [protein_id=XP_016498450.1] [location=complement(join(25476..25559,25676..25898,26739..26905,27007..27141,32066..32231,32489..32567,32684..32792,32864..32965,33335..33387,33526..33706,34393..34545))] [gbkey=CDS]
Sequence

ATGGAGCAAGAATTAAATTCAAAGCTTAGGATTCAGAACAATTCACCAAATGCTCAAAGG
TCTAAGAGCTTCGCATTTAGAGCACCTCAGGTGAATTTCACAATCCAAGATTTTGAATTG
GGAAAGATCTATGGAGTTGGTTCTTATTCCAAGGTTGTCAGAGCAAAAAAGAAAGATACA
GGGAATGTTTATGCCTTGAAGATCATGGACAAAAAGTTCATCACTAAAGAAAATAAGACT
GCTTATGTGAAATTAGAGAGAATTGTGCTTGATCAACTGGATCATCCTGGCATTGTACCA
CTATTTTTTACCTTCCAAGACACTTTTTCACTATACATGGGCCTGGAGTCCTGCGAAGGT
GGGGAGCTTTTTGATCAAATTACCCGGAAAGGCCGTTTGTCTGAGGAGGAGGCTCGTTTT
TATGCAGCTGAAGTAGCAGATGCTCTTGAATATATACACAGCATGGGATTGATTCATCGA
GATATTAAGCCCGAGAACCTGCTACTTACTGCAGATGGACATATTAAAGTTGCCGACTTT
GGCAGTGTAAAGCCCATGCAAGATAGCAGAATAACAGTCCTTCCAAATGCAGCATCAGAT
GACAAGGCTTGTACTTTTGTGGGGACAGCTGCATATGTGCCTCCTGAAGTTTTAAATTCC
TCTCCTGCAACTTTTGGAAATGATCTCTGGGCACTTGGCTGCACCTTGTATCAAATGCTT
TCAGGAACTTCTCCCTTTAAAGATGCCAGCGAATGGCTCATCTTTCAAAGAATCATTGCA
AGAGATATCAGGTTCCCAAATCATTTTTCAGATGAAGCCAGAGATCTCATTGATAGGTTA
CTGGATATTGATCCTAGCCGAAGACCGGGTGCTGGACCTGATGGTTATGCTTCACTGAAG
AACCATCCTTTCTTTAGGGAGGTTGATTGGGATAGTTTAAGGTCTCAAACTCCTCCATGT
CTTGCTGCAGAGCCAAAAGCCCACTCTACTCGTAGCAGTGGTGAAGATCAAGATTCTTCA
TGTAATCCATCACATATTGGGGATGGATCAGCTAGAACTAATGATGGAAATGGTGGTACA
ACATCCTCTTCTGAAGCTGGTAGCATTACCAGGCTTGCTTCAATTGACTCTTTTGATTCA
AAATGGAAACAATTTTTGGAGCCTGGTGAATCCGTTCTTATGATCTCCATGGTGAAAAAG
ATGCAGAAGCTTACAAGCAAGAAAGTTAAGCTTATCCTGACAAATAAGCCAAAGTTGATC
TATGTAGACCCCTCAAAGTTGGTGGTCAAAGGGAACATTATATGGTCCGACAATTCTAAC
GATCTTAGTATTCAAGTCACAAGTCCTTCACAGTTTAAGGTTTGCACACCAAAGAAAGTA
TTGTCTTTCGAGGATGCTAAGCAACGAGCAATGCAGTGGAAAAAGGCAATTGAAGCTCTC
CAAAACCGGTGA

Peptide Sequence

PEP ID

XP_016498450.1
PEP Infomation

PREDICTED: 3-phosphoinositide-dependent protein kinase 2-like isoform X2 [Nicotiana tabacum]
Sequence

MEQELNSKLRIQNNSPNAQRSKSFAFRAPQVNFTIQDFELGKIYGVGSYSKVVRAKKKDT
GNVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVPLFFTFQDTFSLYMGLESCEG
GELFDQITRKGRLSEEEARFYAAEVADALEYIHSMGLIHRDIKPENLLLTADGHIKVADF
GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML
SGTSPFKDASEWLIFQRIIARDIRFPNHFSDEARDLIDRLLDIDPSRRPGAGPDGYASLK
NHPFFREVDWDSLRSQTPPCLAAEPKAHSTRSSGEDQDSSCNPSHIGDGSARTNDGNGGT
TSSSEAGSITRLASIDSFDSKWKQFLEPGESVLMISMVKKMQKLTSKKVKLILTNKPKLI
YVDPSKLVVKGNIIWSDNSNDLSIQVTSPSQFKVCTPKKVLSFEDAKQRAMQWKKAIEAL
QNR

Transcript Sequence

Gene sequence data has not been registered.